Plot ALE curves of a FINN model

Plots the accumulated local effect (ALE) curves produced by ALE() as a grid: one row per demographic process (growth, mortality, regeneration) and one column per environmental predictor. When several species are present, their curves are overlaid in the same panel as one coloured line each.

Usage

# S3 method for class 'FINNale'
plot(x, process = NULL, scale = FALSE, ...)

Arguments

x

an object of class FINNale (returned by ALE()).

process

(character|NULL)
restrict the plot to one process ("growth", "mortality" or "regeneration"); NULL (default) plots all three.

scale

(logical(1))
if TRUE, divide each curve by the SD of its process x species rate so the effects are dimensionless and comparable (a shared y-axis is then used); if FALSE (default) the raw ALE is shown with free y-axes.

...

currently ignored.

Value

invisibly, the ggplot object.